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This section provides some interesting information on various applications that have been created using fiber optic spectrometers and other types of analytical instrumentation.  If you have an interesting application that you would like to share with others, please send your article to applications@stellarnet-inc.com

 
Customer Applications Description

Agricultural and Food

 
Plant Reflectance Spectral reflectance from plants can indicates plant stress and predict growth rate
Lumber Colorimetery Initial high-temperature schedule to reduce drying time and control kiln brown stain in ponderosa pine shop lumber. The surface color and lightness of rough green and dry fleshly planed boards were determined using a StellarNet Spectrometers
Surface Characterization of Weathered Wood-Plastic Composites Produced from Modified Wood Flour The effects of weathering on the surface properties of wood-plastic composites (WPC) were examined. High-density polyethylene WPCs made from modified wood flour were subjected to accelerated (xenon-arc) weathering. Colorimetery and Fourier-transform infrared spectroscopy were employed to monitor the color change and surface chemistries of the weathered WPC surface. The study showed that longer exposure time caused higher oxidation, lower wood lignin and higher plastic content of the weathered WPC surface.
Onions A fiber optic sensor measures percent soluble solids in onions for a big pay off at market time.
Contaminants on Poultry Processing Equipment Detection of Fecal/Ingesta Contaminants on Poultry Processing Equipment Surfaces By Visible and Near-Infrared Reflectance Spectroscopy

Environmental and Ecology

 
Remote Sensing Monitoring- Tallapoosa Watershed Hyperspectral Reflectance Measurements of Chlorophyll Concentration and Related Water Quality Predictors
Influence of plumage colour on prey response: does habitat alter heron crypsis to prey? The foraging strategies of wading birds may be influenced by their degree of crypsis to aquatic prey. White
plumage has been hypothesized to be adaptive for herons hunting in open water habitats. We tested this
hypothesis with laboratory and field experiments with multiple prey species. The foraging strategies of wading birds may be influenced by their degree of crypsis to aquatic prey. White plumage has been hypothesized to be adaptive for herons hunting in open water habitats. We tested this hypothesis with laboratory and field experiments with multiple prey species.
Spectral Signatures of surface materials in pig buildings Spectral Signatures of the reflectance of visual and near infrared radiation are used to make statistically significant discrimination between clean and dirty pig building areas
Birds- Black Phoebes Exploring how the Black Phoebe’s (a small bird that is a sit-and-wait predator) vision, the reflectance of prey items and the background, and irradiance interacted to change how the bird looked for food items.
Removing Organic Compounds from Aqueous Medium via Wet Peroxidation by Gold Catalysts

A new heterogeneous Fenton-like system, consisting of supported Au catalysts and hydrogen peroxide, was proved to be effective in removing low level organic compounds (ca. 100 ppm) such as phenol, ethanol, formaldehyde, and acetone in aqueous solution. Among all gold catalysts the Au/hydroxyapatite (Au/HAp) exhibits the highest activity, and even better than the conventional iron ions exchanged zeolite (Fe/ZSM-5) catalyst. In particular, unlike the limited operational pH range (pH: 25) for the other heterogeneous Fenton catalysts such as Fe/ZSM-5, Au/HAp shows higher stability even in strong acid solution (pH 2), due to almost no leaching of active metal from supports into solution. It can be potentially applied in treating the industrial wastewaters with strong acidity and purifying drinking water. In addition, in the case of complete oxidation of phenol, a plausible route was suggested for deep understanding of this process.

The variation of H2O2 concentration during reaction was analyzed colorimetrically using a UV–vis spectrophotometer (Epp2000, StellarNet Inc.) after complexation with a TiOSO4/H2SO4 reagent (16). ...

Female Preferences for Aposematic Signal Components in a Polymorphic Poison Frog

Aposematic signals may be subject to conflicting selective pressures from predators and conspecifics. We studied female preferences for different components of aposematic coloration in the polymorphic poison frog Oophaga pumilio across several phenotypically distinct populations.

Physics

 
OH Emission Spectra of Hybrid Rocket Motors
Using PMMA and HTPB

Ultraviolet-Visible Spectrometry Characterization of
Combustion in Hybrid Rocket Motors
The development of sensors for hybrid rocket motors has lead to the use of near-infrared diode lasers for characterizing hybrid rocket plumes. Emission Spectra obtained can be used to calculate species concentrations and temperatures, both spatially and temporally, in rocket exhaust plumes. In this paper we report our findings from a study of the emission spectra of hybrid rocket exhaust plumes in the ultraviolet, UV, visible, VIS, and near-infrared, NIR, regions of the electromagnetic spectrum.

Spectroscopic Diagnostics of an Atmospheric Microwave Plasma for Monitoring Metals Pollution

A 1.5 kW, 2.45 GHz microwave sustained plasma in a flowing sample of stack exhaust gas has been shown in recent DOE/EPA testing to be an accurate monitor of trace hazardous metals (in the part per billion range) such as lead, chromium, and beryllium. Optical-UV spectroscopic studies are being carried out to better understand this particular atmospheric pressure plasma torch.

Organic semiconductor devices for micro-optical applications

The use of organic optoelectronic devices such as organic light-emitting diodes and organic photodiodes in micro-optical systems is discussed. Potential applications like optical interconnects and optical sensor systems are examined. Device characteristics including emission spectra, I-V-curves and the dynamic behaviour are analyzed. In the combination with a polymeric optical fibre (POF) a transmission line comprising a organic light emitting diode and organic photodiodes is demonstrated. An important step towards integration is realized by coupling the amplified spontaneous emission of an organic semiconductor material into a single mode polymethylmethacrylate (PMMA) waveguide.

Colour-tunable spiral photonic actuators

Combining the multi-faceted environmental responsiveness of polymers with photonically active structures, we developed spiral photonic actuators which can reversibly change both shape and colour in response to the chemical environment.

Wavelength-scalable hollow optical fibres with large photonic bandgaps for CO2 laser transmission

Here we report on the design and drawing of a hollow optical fibre lined with an interior omnidirectional dielectric mirror. Confinement of light in the hollow core is provided by the large photonic bandgaps established by the multiple alter-nating submicrometre-thick layers of a high-refractive-index glass and a low-refractive-index polymer. The fundamental and high-order transmission windows are determined by the layer dimensions and can be scaled from 0.75 to 10.6mm in wavelength.The transmission losses are found to be less than 1.0 dB m 21, orders of magnitude lower than those of the intrinsic fibre material, thus demonstrating that low attenuation can be achieved through structural design rather than high-transparency material selection.

Physical properties of CdS/ITO thin films growth by CBD technique with substrate oscillating agitation

Cadmium sulphide (CdS) thin films deposited on indium tin oxide (ITO) substrates were prepared by chemical bath deposition technique by using different conditions to agitate the bath and the substrate. The deposited films were characterized on their morphology, on the band gap energy, and on thickness. The implemented novel technique for substrate oscillation has shown to improve the films quality, by the chemical bath without colloidal precipitates and by the clean film surfaces obtained. CdS films with variable deposition time can be achieved depending on the agitating technique. In addition, by oscillating only the substrate during deposition is possible to obtain clean films and avoid the formation of colloidal precipitates on the chemical bath, normally presented when it is magnetically or ultrasonically agitated.

High Power UV and VUV Pulsed Excilamps

Emission characteristics of a nanosecond discharge in inert gases and its halo-genides without preionization of the gap from an auxiliary source have been investigated. A volume discharge, initiated by an avalanche electron beam (VDIAEB) was realized at pressures up to 12 atm. In xenon at pressure of 1.2 atm, the energy of spontaneous radiation in the full solid angle was 45 mJ/cm 3 , and the FWHM of a radiation pulse was 110ns. The spontaneous radiation power rise in xenon was observed at pressures up to 12 atm.
Pulsed radiant exitance of inert gases halogenides excited by VDIAEB was 4.5 kW/cm 2 at e±ciency up to 5.5 %.

Chemistry

 
Living anionic polymerization of methyl methacrylate controlled by metal-free phosphazene catalyst as observed by small-angle neutron scattering, gel permeation chromatography and UV-visible spectroscopy Phosphazene (PZN) catalyst, PZN catalyst coexisting with a co-catalyst 1-hydroxycyclohexyl phenyl ketone and polymethylmethacrylate (PMMA) have been observed for the first time by small-angle neutron scattering (SANS) and UV-visible spectroscopy to elucidate the aggregation behavior of the PZN molecules themselves and the state of living chain ends in a living polymer solution.
Electrochemical Synthesis of Conducting Polymers on Carbon Nanotube Films and Its Effect on Electrochemical Capacitance Polyaniline and polypyrrole were considered as pseudocapacitive coatings for carbon nanotube film electrodes. The conducting polymers were deposited electrochemically using cyclic voltammetry. The electrochemical effects of the number of voltage cycles and monomer and electrolyte concentrations on film thickness were studied. The effects of the polymer coating on the capacitance of the CNT electrodes were analyzed as well. The final results were evaluated using CV and scanning electron microscopy techniques.
Nano@micro: General Method for Entrapment of Nanocrystals in Sol−Gel-Derived Composite Hydrophobic Silica Spheres

A general method for entrapment of hydrophobically coated nanocrystals in micrometer and submicrometer composite silica spheres, nano@micro, was developed. The method employs two starting solutionshydrophobic solvent containing the sol−gel precursor, a polymer, and the nanocrystals, and an emulsifying hydrophilic phase which catalyzes the sol−gel process. The use of a hydrophobic polymer, polystyrene, serves to encapsulate the nanocrystals inside the spheres while maintaining many of their original properties. The obtained nano@micro spheres were characterized structurally by transmission electron microscopy and scanning electron microscopy, chemically by energy dispersive X-ray spectroscopy, and optically by ensemble and single-particle fluorescence spectroscopy. It is possible to control the size of the microspheres from the 100 nm scale to the micrometer scale, with good monodispersivity and with good separation between the microspheres. The method is demonstrated for encapsulating a wide variety of nanocrystals, primarily semiconductors covering different spectral bands, and of different shapes including spheres and rods. The semiconductor nanocrystals impart widely tunable emission to the microspheres. A similar encapsulation technique was also applied to thiol-coated Au particles. The technique is generally applicable to other hydrophobic nanocrystal systems of magnetic, oxide, and other materials.

Fluorescence spectra were recorded using a spectrometer/CCD setup (StellarNet model EPP2000). ...

Multiple-Color Electrochromism from Layer-by-Layer-Assembled Polyaniline/Prussian Blue Nanocomposite Thin Films

The creation of new materials systems for lightweight and flexible displays is an extremely active research field. Electrochromic displays possess a keen advantage over other technologies because it is possible for a single electrochromic pixel to produce multiple colors in addition to white, depending on applied potential. This possibility has proven quite challenging to achieve in practice. Here we present the successful fabrication of a multiply colored electrochromic electrode using layer-by-layer (LBL) assembly. The electrode films are created by exploiting intrinsic electrostatic attraction between the polycation poly(aniline) (PANI) and a negatively ionized Prussian Blue (PB) nanoparticle dispersion. The resultant organic/inorganic nanocomposites exhibit excellent smoothness and a classical linear increase in film thickness with assembly exposure steps. Electrochemical and spectrophotometric characterization confirms the distinct and noninteracting contributions from PANI and PB and reveals that both are fully electrochemically accessible even in thick, high contrast films. Switching speed is accelerated due to the incorporation of electronically conducting PANI. The PANI/PB nanocomposite undergoes an uncolored to green to blue transition over the potential range from −0.2 to 0.6 V vs K-SCE. These results validate an LBL-assembly-based intermixing strategy for the design of multiple-hue electrochromic electrode films. Future horizons include extension to other materials, with the eventual goal of creating a single electrode film or electrochemical cell capable of displaying any visible color on demand.

Spectral characterization was performed with a StellarNet EPP2000 concave grating UV−vis−NIR spectrophotometer with combined incandescent and deuterium lamp sources....

Chemical Synthesis of a Polyaniline/Gold Composite Using Tetrachloroaurate

The chemical synthesis of polyaniline (PANI) is explored using tetrachloroaurate, AuCl4-. These studies provide a simple method for the oxidation of aniline by AuCl4- and simultaneous formation of bulk quantities of a PANI/Au composite. In situ UV/vis spectroscopy indicates that the rate of formation of gold colloids and intermediate (short-chain) PANI species is rapid in comparison to that of the long-chain PANI. Longer PANI chains are produced at a slower rate, at the expense of short-chain intermediate species. The gold particles act as nucleation sites for the oxidative formation of PANI, encapsulating the metal in the form of a polymer/metal composite. Results from the elemental analysis and the FTIR spectra of the composite material are consistent with PANI produced using only ammonium persulfate as the oxidant. In addition, XPS, optical microscopy, and TEM diffraction show that the gold particles are polycrystalline with relatively constant diameter (0.8−1 μm). Finally, the PANI/Au/HBF4 conductance does not change significantly with the introduction of Au particles, relative to that of PANI/HBF4 without Au particles. These studies provide a new method for growth of PANI/metal composites where the presence of the metal in the polymer does not adversely affect the electronic structure.

All spectra were obtained using a StellarNet EPP2000 fiber optic spectrophotometer equipped with a D2 lamp and tungsten filament source that were coupled into a single fiber. ...

Titania−Acrylic Coil Reactor for Photocatalytic Water Purification and Sterilization

A titania−acrylic composite reactor was constructed with a coil geometry. The presence of multiple titania layers within the reactor increases the titania surface area while making maximum use of the illumination provided. Both compact fluorescent blacklight (CFL) and ultraviolet light emitting diodes (LEDs) were used as illumination sources. An external pump was used to recirculate 650−800 mL of water containing organic, metallic, or bacterial contamination through the coil reactor. Complete purification of the water was achieved within 300 min with 10 ppm methylene blue, 10 ppm methyl orange, 20 ppm Pb2+, and 2200 colony forming units per milliliter (CFU/mL) of E. coli respectively using the CFL source. The effectiveness, low cost, durability, ruggedness, and energy efficiency of this reactor are advantageous for both portable and fixed-base applications.

Spectra from both light sources and UV−vis spectra for MB and MO were collected on a StellarNet ... Irradiance spectra were collected with a fiber-mounted cosine receptor (StellarNet model CR2). ...

Electron Exchange between α-Keggin Tungstoaluminates and a Well-Defined Cluster-Anion Probe for Studies in Electron Transfer

Fully oxidized α-AlIIIW12O405- (1ox), and one-electron-reduced α-AlIIIW12O406- (1red), are well-behaved (stable and free of ion pairing) over a wide range of pH and ionic-strength values at room temperature in water. Having established this, 27Al NMR spectroscopy is used to measure rates of electron exchange between 1ox (27Al NMR: 72.2 ppm relative to Al(H2O)63+; ν1/2 = 0.77 Hz) and 1red (74.1 ppm; ν1/2 = 0.76 Hz). Bimolecular rate constants, k, are obtained from line broadening in 27Al NMR signals as ionic strength, μ, is increased by addition of NaCl at the slow-exchange limit of the NMR time scale. The dependence of k on μ is plotted using the extended Debye−Hückel equation: log k = log k0 + 2αz1z2μ1/2/(1 + βrμ1/2), where z1 and z2 are the charges of 1ox and 1red, α and β are constants, and r, the distance of closest contact, is fixed at 1.12 nm, the crystallographic diameter of a Keggin anion. Although not derived for highly charged ions, this equation gives a straight line (R2 = 0.996), whose slope gives a charge product, z1z2, of 29 ± 2, statistically identical to the theoretical value of 30. Extrapolation to μ = 0 gives a rate constant k11 of (6.5 ± 1.5) × 10-3 M-1 s-1, more than 7 orders of magnitude smaller than the rate constant [(1.1 ± 0.2) × 105 M-1 s-1] determined by 31P NMR for self-exchange between PVW12O403- and its one-electron-reduced form, PVW12O404-. Sutin's semiclassical model reveals that this dramatic difference arises from the large negative charges of 1ox and 1red. These results, including independent verification of k11, recommend 1red as a well-behaved electron donor for investigating outer-sphere electron transfer to molecules or nanostructures in water, while addressing a larger issue, the prediction of collision rates between uniformly charged nanospheres, for which 1ox and 1red provide a working model.

Instrumentation. UV−vis spectra were acquired using Hewlett-Packard 8452A or StellarNet Inc. EPP2000 spectrophotometers equipped with diode-array detectors and immersible fiber-optic probes. ...

Evaluation of Photon Absorption in an Aqueous TiO2 Slurry Reactor Using Monte Carlo Simulations and Macroscopic Balance

The radiation field in an annular photocatalytic reactor is simulated using a Monte Carlo method (MC) for two TiO2 suspensions in water. Simulations are performed by using both the spectral distribution and the wavelength-averaged scattering and absorption coefficients. The Henyey−Greenstein phase function is adopted to represent forward, isotropic, and backward scattering modes. It is assumed that the UV lamp reflects the backscattered photons by the slurred medium. Photoabsorption rates using MC simulations and spectral distribution of the optical coefficients agree closely with experimental observations from a macroscopic balance. It is found that the scattering mode of the probability density function is not a critical factor for a consistent representation of the radiation field. MC simulation for the optimal catalyst concentration reveals that the maximum LVREA is reached at a concentration of 0.14 g L−1 for TiO2 Degussa P25. From this concentration, the apparent optical thickness is determined to be 2.8476 which is in agreement with the optimal one previously reported. This concentration is comparable to that determined experimentally for phenol photocatalytic degradation.

The radiation field in an annular photocatalytic reactor is simulated using a Monte Carlo method (MC) for two TiO2 suspensions in water. Simulations are performed by using both the spectral distribution and the wavelength-averaged scattering and .

Soluble Narrow Band Gap Polymers
(Dry-Box)
Soluble Narrow Band Gap and Blue Propylenedioxythiophene-Cyanovinylene Polymers as Multifunctional Materials for Photovoltaic and Electrochromic Applications

Bio-Science

 

Human Pigmentation Variation: Evolution, Genetic Basis, and Implications for Public Health
 

Pigmentation, which is primarily deter-mined by the amount, the type, and the distribution of melanin, shows a remarkable diversity in human populations, and in this sense, it is an atypical trait.Numerous
genetic studies have indicated that the average proportion of genetic variation due to differences among major continental groups is just 10–15% of the total genetic variation. In contrast, skin pigmentation shows large differences among continental populations. The reasons for this discrepancy can be traced back primarily to the strong influence of natural selection, which has shaped the distribution of pigmentation according to a latitudinal gradient. Research during the last 5 years has substantially increased our understanding of the genes involved in normal pigmentation variation in human populations. At least six genes have been identified using genotype/phenotype association studies and/or direct functional assays, and there is evidence indicating that several additional genes may be playing a role in skin, hair, and iris pigmentation. The information that is emerging from recent studies points to a complex picture where positive selection has been acting at different genomic locations, and for some genes only in certain population groups.

Extinction Cross-Section Measurements of
Bacillus globigii Aerosols

In a continuing series of experiments designed to determine the spectral extinction cross section of bacterial aerosols,  spectral transmittance was measured as a function of particle concentration, and extinction cross sections were calculated. Visible band measurements of Bacillus globigii aerosols indicated a slight increase in the extinction cross section with increasing wavelength. The extinction cross section was estimated to be 2.58 (±0.25)10 8 cm 2 at the 543-nm wavelength.

Mitochondrial succinic-semialdehyde dehydrogenase of the γ-aminobutyrate shunt is required to restrict levels of reactive oxygen intermediates in plants

The γ-aminobutyrate (GABA) shunt is a metabolic pathway that bypasses two steps of the tricarboxylic acid cycle, and it is present in both prokaryotes and eukaryotes. In plants the pathway is composed of the calcium/calmodulin-regulated cytosolic enzyme glutamate decarboxylase and the mitochondrial enzymes GABA transaminase and succinic-semialdehyde dehydrogenase (SSADH). The activity of the GABA shunt in plants is rapidly enhanced in response to various biotic and abiotic stresses. However the physiological role of this pathway remains obscure. To elucidate its role in plants, we analyzed Arabidopsis T-DNA knockout mutants of SSADH, the ultimate enzyme of the pathway. Four alleles of the ssadh mutation were isolated, and these exhibited a similar phenotype. When exposed to white light (100 μmol of photons per m2 per s), they appear dwarfed with necrotic lesions. Detailed spectrum analysis revealed that UV-B has the most adverse effect on the mutant phenotype, whereas photosynthetic active range light has a very little effect. The ssadh mutants are also sensitive to heat, as they develop necrosis when submitted to such stress. Moreover, both UV and heat cause a rapid increase in the levels of hydrogen peroxide in the ssadh mutants, which is associated with enhanced cell death. Surprisingly, our study also shows that trichomes are hypersensitive to stresses in ssadh mutants. Our work establishes a role for the GABA shunt in preventing the accumulation of reactive oxygen intermediates and cell death, which appears to be essential for plant defense against environmental stress.

Sensitivity analysis of CDOM spectral slope in artificial and natural samples: an application in the central eastern Mediterranean Basin

 

In the past two decades, optical properties of chromophoric dissolved organic matter (CDOM) in marine environments have been extensively studied. Many of these studies report CDOM properties for the offshore environment where this complex mixture of optically active compounds is strongly diluted. Nevertheless, autochthonous and allochthonous sources have been identified and sinks related to photodegradation and bacterial activity have been demonstrated. The calculation of the spectral slope of the CDOM absorption curve has been proven to be useful and is often reported. However, a rigorous uncertainty analysis of the slope calculation is rarely reported. In this paper, we propose a method to evaluate the uncertainty of CDOM spectral slope calculated between 270 and 400 nm, using both naturally sampled and artificial solutions. We use these results to study the ultra-oligotrophic waters of the Mediterranean Sea (central eastern basin), where little is known about CDOM spatial distribution. We show that dilutions of both artificial and natural samples produce a Gaussian distribution of spectral slopes, indicating that consistent values may be determined, with a typical uncertainty of ±0.0004 nm−1 when absorption at 300 nm was greater then 0.1 m−1 (0.1 m pathlength). Comparing the distribution of spectral slopes from central eastern basin samples to a Gaussian distribution, we show differences between measurements that were significantly different. These values allow us to distinguish possible sources (algal derived CDOM), sinks (e.g. photo-bleaching) at different depths. We propose a subdivision of CDOM compounds into refractory and semilabile/refractory pools and evaluate the CDOM spectral slope of algal derived CDOM released at or near deep chlorophyll maximum.

Optical Touch Pointer for Fluorescence Guided Glioblastoma Resection Using 5-Aminolevulinic Acid

Background and Objective: Total tumor resection in patients with glioblastoma multiforme (GBM) is difficult to achieve due to the tumor’s infiltrative way of growing and morphological similarity to the surrounding functioning brain tissue. The diagnosis is usually subjectively performed using a surgical microscope. The objective of this study was to develop and evaluate a hand-held optical touch pointer using a fluorescence spectroscopy system to quantitatively distinguish healthy from malignant brain tissue intraoperatively. Study Design/Materials and Methods: A fluorescence spectroscopy system with pulsed modulation was designed considering optimum energy delivery to the tissue, minimal photobleaching of PpIX and omission of the ambient light background in the operating room (OR). 5-Aminolevulinic acid (5-ALA) of 5 mg/kg body weight was given to the patients with a presumed GBM prior to surgery. During the surgery a laser pulse at 405nm was delivered to the tissue. PpIX in glioblastoma tumor cells assigned with peaks at 635 and 704nm was detected using a fiber optical probe. Results/Conclusion: By using the pulsed fluorescence spectroscopy, PpIXfluorescence isquantitatively detected in the GBM. An effective suppression of low power lamp background from the recorded spectra in addition to a significant reduction of high power surgical lights is achieved.

Ablation of Liver Cancer Cells
in Vitro by a Plasma Needle

A plasma needle using a dielectric barrier discharge reactor at atmospheric pressure with a funnel-shaped nozzle was developed. The preliminary characteristics of the plume and applications to the ablation of cultured human hepatocellular carcinoma HCC BEL-7402 cell line are presented.

Process Monitoring and Quality Control

 
Semi-Conductor The MPSS (Multi Probe Spectrophotometer System) is a multi-channel process control monitor used in semi-conductor fabrication and other real-time process applications. 
Alcohol A dual beam process monitor using "Neural Networks" to measure the concentration of alcohol in a process stream.
Film Deposition A multi-channel system used to monitor silver film deposition on a moving roll of plastic using transmission and reflectance.
Dilatometer The "Dilatometer" analytical instrument designed for specifically for polymer chemists.
Colorimeter A triple-channel SpectroColorimeter used as a process Quality Control monitor for plastic injection molding operations.
StellarNet Patents A list of patents filed using StellarNet spectrometers
 
 
       
 

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